Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934053.1_cds_XP_016480199.1_71664
CDS Infomation

[gene=LOC107801389] [db_xref=GeneID:107801389] [protein=cleavage and polyadenylation specificity factor subunit 3-II-like isoform X2] [protein_id=XP_016480199.1] [location=join(45340..45413,46081..46153,47441..47558,48412..48485,49681..49817,50448..50511,51328..51393,52124..52193,54667..54771,54960..55101,55860..55959,56299..57096)] [gbkey=CDS]
Sequence

ATGATACTCTGCCACTACTTATTGTCGTATGTTGTGTATATATCATCAGTGGCGGAGCCA
GGAATTTTAACGAGCCACTTAGACCATATTGGAGCTCTTCCATATTTTACTGAAGTGTGT
GGGTATAATGGCCCCATATACATGACGTATCCAACAAAAGCGTTGGCTCCATTGATGCTG
GAAGATTATCGCAAAGTGATGGTTGATAGAAGAGGAGAGGAGGAGCAATTTAGTTCTGAG
CATATTACAGAATGCATGAAGAAAGTTACTGCGGTGGATCTGAAGCAGACTGTGCTGGTT
GACGGGGACCTTCTGATTCGAGCATACTATGCTGGACATGTTCTTGGTGCTGCAATGTTT
TATGCTAAAGTGGGTGATGCTGCTATAGTGTACACTGGCGATTATAATATGACACCCGAT
AGACATCTTGGAGCTGCTCAAATTGATCGGCTGCAGCTGGACCTTGTCATAACAGAGTCA
ACTTATGCAACCACCTTCCGTGATTCCAAATATGCCCGGGAGAGGGAGTTTCTCGAAGCA
GTTCACAAATGTGTTGCTAGTGGAGGAAAGGTGCTCATCCCTACATTTGCTCTGGGAAGA
GCTCAGGAACTCTGTATGCTATTGGATGACTATTGGGAGCGAATGAATCTTAAAGCTCCT
ATTTATTTTGCCGCAGGTTTGACTATTCAAGCTAATATGTACTACAAAGTTCTCATAAAC
TGGACCAGCCAAAAGGTGAAAAGTACTTCCGCAACACGAAATGCATTTGACTTCAAAAAT
GTCCACAGTTTCGATCGTTCCATGATAAATGCTCCTGGACCTTGTGTTTTATTTGCTACT
CCGGGCATGATAAGTGGGGGATTTTCACTTGAAGTTTTCAAGCAATGGGCTCCGTGCGAA
CAGAACCTCATAACACTCCCAGGATATTGCGTAGCTGGGACAGTAGGACACAGGTTGATG
TCCGCTAAAACTCCCGCCAAAATAAATGTTGATGAAAATACCCAGATTGATGTGCGCTGC
CAGATCCATCAGCTGTCTTTTAGTCCACATACTGATGCCAAGGGAATCTTGGATTTGGTC
AAATTTCTATCACCCAAACATGTAATACTTGTGCATGGCGAAAAGCCCAAGATGGCATTG
CTTAAAAAGGGAATTGAATCAGACTTCGGGATCCCGTGCTATTATCCTGCAAATAACGAG
ATTGTGTGCATTCCCTCAACTCTCTATGTTAAAGCTGATGCATCCAGAGAATTTCTTAAA
AGTTCTTTGAGCCCAAATTTCAAGTTTCTAAACACAAGTTCAAGAGCAGACATTGATTTG
ATTCTGAATGAGAGAACCGAGTCTTTTGTGCAAGTATGTGATGACAGAGTAGCTGAAGGG
GTGCTCACCATGCAGAAAAACCAGCACCCCAAAATTGTGCACCAGAATGAGCTAGTGGCC
ATGGTAGGAGGAGAAAATCATGAAGTTCAGTTTGCTTACTGTTGTCCAGTGCGTGTCTCT
GATGAATGTAAAGATGTAGCTCCGTCACCAGGAGAAAACACGCCTCCTGTGCTTGATAAA
TGCCTGTGGCTACACTTATTATACACAAAACTATCAAATGATTTTCAAGATGTAACCTAT
CAGAATGATGGAGACCGTCTCCAAATAGAGTCATTTACTGTCTCTGTGTGTCTGAAGGAG
AAGTGTCCTCATAGAACTCATGTTAGTCCTGATAGCACATCTGAAACAGTAAACTTTTGT
TGCTTGTGGTCAATGGTAGATGAGAAACTTGCTTGGAGGGTCATTTCAATCATGAAGAAT
TTGGAGTTGAAGACTGGTTAA

Peptide Sequence

PEP ID

XP_016480199.1
PEP Infomation

PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II-like isoform X2 [Nicotiana tabacum]
Sequence

MILCHYLLSYVVYISSVAEPGILTSHLDHIGALPYFTEVCGYNGPIYMTYPTKALAPLML
EDYRKVMVDRRGEEEQFSSEHITECMKKVTAVDLKQTVLVDGDLLIRAYYAGHVLGAAMF
YAKVGDAAIVYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYATTFRDSKYAREREFLEA
VHKCVASGGKVLIPTFALGRAQELCMLLDDYWERMNLKAPIYFAAGLTIQANMYYKVLIN
WTSQKVKSTSATRNAFDFKNVHSFDRSMINAPGPCVLFATPGMISGGFSLEVFKQWAPCE
QNLITLPGYCVAGTVGHRLMSAKTPAKINVDENTQIDVRCQIHQLSFSPHTDAKGILDLV
KFLSPKHVILVHGEKPKMALLKKGIESDFGIPCYYPANNEIVCIPSTLYVKADASREFLK
SSLSPNFKFLNTSSRADIDLILNERTESFVQVCDDRVAEGVLTMQKNQHPKIVHQNELVA
MVGGENHEVQFAYCCPVRVSDECKDVAPSPGENTPPVLDKCLWLHLLYTKLSNDFQDVTY
QNDGDRLQIESFTVSVCLKEKCPHRTHVSPDSTSETVNFCCLWSMVDEKLAWRVISIMKN
LELKTG

Transcript Sequence

Gene sequence data has not been registered.